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Getting Started

Why High-Dimensional Statistics?
Atacama Soil Microbiome
Download the Tutorial Data
End-to-End Tutorial
Prerequisites & Installation

Start small: a 13-ASV network

Graphical Lasso Models
Log-Contrast Models

Scale up: hundreds of features

Overview

Reference

Command Coverage Matrix
q2-gglasso Parameter Reference
q2-classo Parameter Reference
Troubleshooting & Known Failure Modes
Appendix: Mathematical Background
Appendix: Shotgun Metagenomics (MOSHPIT cocoa)
References

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By Biomedical Statistics and Data Science Group @ LMU & Helmholtz Munich

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