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Getting Started
Atacama Soil Microbiome
Prerequisites & Installation
Installing q2-gglasso
Installing q2-classo
Graphical Lasso Models
Single Graphical Lasso
Single Graphical Lasso with Latent Variables
Adaptive Graphical Lasso
Interpretation
High-Dimensional Example (300 ASVs)
Log-Contrast Models
Data Preparation
Regression
Log-Contrast
With trac
Classification
Log-Contrast
With trac
Advanced: Concomitant Formulation
Interpretation
High-Dimensional Example (300 ASVs)
Appendix: Mathematical Background
References
Index
